User:Takatsugu Miyazaki - Revision history

Takatsugu Miyazaki at 05:14, 5 September 2025

2025-09-05T05:14:55Z

Takatsugu Miyazaki at 07:37, 28 April 2024

2024-04-28T07:37:07Z

Takatsugu Miyazaki at 09:16, 18 April 2024

2024-04-18T09:16:03Z

Takatsugu Miyazaki at 05:47, 15 July 2023

2023-07-15T05:47:36Z

Takatsugu Miyazaki at 05:45, 15 July 2023

2023-07-15T05:45:21Z

Takatsugu Miyazaki at 03:32, 19 June 2023

2023-06-19T03:32:08Z

Takatsugu Miyazaki at 10:56, 1 May 2023

2023-05-01T10:56:33Z

Takatsugu Miyazaki at 10:55, 1 May 2023

2023-05-01T10:55:04Z

Takatsugu Miyazaki at 10:45, 1 May 2023

2023-05-01T10:45:25Z

Takatsugu Miyazaki at 08:13, 13 April 2023

2023-04-13T08:13:03Z

@@ Line 2: / Line 2: @@
 Takatsugu Miyazaki is an Associate Professor of [https://green.shizuoka.ac.jp/en/ Research Institute of Green Science and Technology] (RIGST) and [https://www.agr.shizuoka.ac.jp/en/ Department of Agriculture, Graduate School of Integrated Science and Technology], at [https://www.shizuoka.ac.jp/english/ Shizuoka University]. He obtained his PhD under the supervision of [[User:Takashi Tonozuka|Takashi Tonozuka]] at Tokyo University of Agriculture and Technology. He is interested in structures and functions of CAZymes, especially glycoside hydrolases and glycosyltransferases from microorganisms and insects. He has contributed to the crystal structure determination of
-*[[GH6]] ''Coprinopsis cinerea'' cellobiohydrolase CcCel6C <cite>Liu2010</cite>
+*[[GH6]] ''Coprinopsis cinerea'' cellobiohydrolase (CcCel6C) <cite>Liu2010</cite>
-*[[GH6]] ''Coprinopsis cinerea'' cellobiohydrolase CcCel6A <cite>Tamura2012</cite>
+*[[GH6]] ''Coprinopsis cinerea'' cellobiohydrolase (CcCel6A) <cite>Tamura2012</cite>
-*[[GH13]]_17 ''Bombyx mori'' sucrose hydrolase BmSUH <cite>Miyazaki2020a</cite>
+*[[GH13]]_17 ''Bombyx mori'' sucrose hydrolase (BmSUH) <cite>Miyazaki2020a</cite>
 *[[GH16]]_16 ''Microbulbifer thermotolerans'' β-agarase <cite>Takagi2015</cite>
-*[[GH27]] ''Arthrobacter globiformis'' isomalto-dextranase <cite>Okazawa2015</cite>
+*[[GH27]] ''Arthrobacter globiformis'' isomalto-dextranase (AgIMD) <cite>Okazawa2015</cite>
-*[[GH31]]_14 ''Pseudopedobacter saltans'' α-galactosidase '''Subfamily First''' <cite>Miyazaki2015a</cite>
+*[[GH31]]_14 ''Pseudopedobacter saltans'' α-galactosidase (PsGal31A) '''Subfamily First''' <cite>Miyazaki2015a</cite>
-*[[GH31]]_15 ''Lactococcus lactis'' subsp. ''cremoris'' α-1,3-glucosidase '''Subfamily First''' <cite>Ikegaya2022</cite>
+*[[GH31]]_15 ''Lactococcus lactis'' subsp. ''cremoris'' α-1,3-glucosidase (LlGH31_u1) '''Subfamily First''' <cite>Ikegaya2022</cite>
-*[[GH31]]_18 ''Enterococcus faecalis'' exo-acting protein-α-''N''-acetylgalactosaminidase '''Subfamily First''' <cite>Miyazaki2020b Miyazaki2022a</cite>
+*[[GH31]]_18 ''Enterococcus faecalis'' exo-acting protein-α-''N''-acetylgalactosaminidase (EfNag31A) '''Subfamily First''' <cite>Miyazaki2020b Miyazaki2022a</cite>
-*[[GH31]]_19 ''Bacteroides salyersiae'' and ''Flavihumibacter petaseus'' α-1,4-galactosidases '''Subfamily First''' <cite>Ikegaya2023</cite>
+*[[GH31]]_19 ''Bacteroides salyersiae'' and ''Flavihumibacter petaseus'' α-1,4-galactosidases (BsGH31_19 and FpGH31_19) '''Subfamily First''' <cite>Ikegaya2023</cite>
 *[[GH32]] ''Bombyx mori'' β-fructofuranosidase BmSUC1 <cite>Miyazaki2020c</cite>
 *[[GH49]] ''Aspergillus brasiliensis'' isopullulanase (''N''-glycan-deficient variant) <cite>Miyazaki2015b</cite>
-*[[GH62]] ''Coprinopsis cinerea'' α-L-arabinofuranosidase CcAbf62A <cite>Tonozuka2017</cite>
+*[[GH62]] ''Coprinopsis cinerea'' α-L-arabinofuranosidase (CcAbf62A) <cite>Tonozuka2017</cite>
 *[[GH63]] ''Escherichia coli'' α-glycosidase YgjK (glycosynthase mutant) <cite>Miyazaki2013a Miyazaki2016</cite>
-*[[GH63]] ''Thermus thermophillus'' mannosylglycerate hydrolase <cite>Miyazaki2015c</cite>
+*[[GH63]] ''Thermus thermophillus'' mannosylglycerate hydrolase (Tt8MGH) <cite>Miyazaki2015c</cite>
-*[[GH65]] ''Flavobacterium johnsoniae'' kojibiose hydrolase <cite>Nakamura2021 Nakamura2023</cite>
+*[[GH65]] ''Flavobacterium johnsoniae'' kojibiose hydrolase (FjGH65A) <cite>Nakamura2021 Nakamura2023</cite>
-*[[GH66]] ''Flavobacterium johnsoniae'' dextranase <cite>Nakamura2023</cite>
+*[[GH66]] ''Flavobacterium johnsoniae'' dextranase (FjGH66) <cite>Nakamura2023</cite>
 *[[GH68]] ''Microbacterium saccharophilum'' β-fructofuranosidase <cite>Tonozuka2012</cite> and its thermostabilized mutants <cite>Ohta2014</cite>
-*[[GH92]] ''Enterococcus faecalis'' α-1,2-mannosidase (Michaelis complex) <cite>Alonso-Gil2022</cite>
+*[[GH92]] ''Enterococcus faecalis'' α-1,2-mannosidase (EfGH92, Michaelis complex) <cite>Alonso-Gil2022</cite>
-*[[GH97]] ''Flavobacterium johnsoniae'' glucodextranase <cite>Nakamura2024</cite>
+*[[GH97]] ''Flavobacterium johnsoniae'' glucodextranase (FjGH97A) <cite>Nakamura2024</cite>
 *[[GH131]] ''Coprinopsis cinerea'' CcGH131A '''Family First''' <cite>Miyazaki2013b</cite>
@@ Line 28: / Line 28: @@
 He also has contributed to identification and characterization of
-*[[GH29]] ''Bombyx mori'' α-L-fucosidase <cite>Nakamura2020</cite>
+*[[GH27]] ''Flavobacterium johnsoniae'' dextranase (FjGH27A) <cite>Nakamura2025</cite>
-*[[GH31]] ''Flavobacterium johnsoniae'' dextranase <cite>Gozu2016 Nakamura2023</cite>
+*[[GH29]] ''Bombyx mori'' α-L-fucosidase (BmFucA) <cite>Nakamura2020</cite>
-*[[GH31]]_10 ''Paenibacillus'' sp. 598K 6-α-glucosyltransferase <cite>Ichinose2017</cite>
+*[[GH31]] ''Flavobacterium johnsoniae'' dextranase (FjDex31A) <cite>Gozu2016 Nakamura2023</cite>
-*[[GH31]]_14 ''Pedobacter heparinus'' α-galactosidase <cite>Miyazaki2015a</cite>
+*[[GH31]]_10 ''Paenibacillus'' sp. 598K 6-α-glucosyltransferase (Ps6GT31A) <cite>Ichinose2017</cite>
-*[[GH31]]_15 ''Cordyceps militaris'' α-1,3-glucosidase <cite>Ikegaya2022</cite>
+*[[GH31]]_14 ''Pedobacter heparinus'' α-galactosidase (PhGal31A) <cite>Miyazaki2015a</cite>
-*[[GH31]]_18 ''Bombyx mori'' exo-acting protein-α-''N''-acetylgalactosaminidase <cite>Ikegaya2021</cite>
+*[[GH31]]_15 ''Cordyceps militaris'' α-1,3-glucosidase (CmGH31_u1) <cite>Ikegaya2022</cite>
 *[[GH63]] ''Aspergillus brasiliensis'' mannosyl-oligosaccharide glucosidase <cite>Miyazaki2011</cite>
-*[[GH65]] ''Microbacterium dextranolyticum'' dextran α-1,2-debranching enzyme <cite>Miyazaki2022b</cite>
+*[[GH65]] ''Microbacterium dextranolyticum'' dextran α-1,2-debranching enzyme (MdDDE) <cite>Miyazaki2022b</cite>
-*[[GH66]] ''Paenibacillus'' sp. 598K dextranase <cite>Mizushima2019</cite>
+*[[GH66]] ''Paenibacillus'' sp. 598K dextranase (PsDEX598) <cite>Mizushima2019</cite>
 *[[GH99]] ''Shewanella amazonensis'' endo-α-1,2-mannosidase <cite>Matsuda2011</cite>
@@ Line 84: / Line 85: @@
 #Ikegaya2023 pmid=37438884
 #Nakamura2024 pmid=38661728
 </biblio>
 <!-- Do not remove this Category tag -->
 [[Category:Contributors|Miyazaki,Takatsugu]]

@@ Line 20: / Line 20: @@
 *[[GH68]] ''Microbacterium saccharophilum'' β-fructofuranosidase <cite>Tonozuka2012</cite> and its thermostabilized mutants <cite>Ohta2014</cite>
 *[[GH92]] ''Enterococcus faecalis'' α-1,2-mannosidase (Michaelis complex) <cite>Alonso-Gil2022</cite>
+*[[GH97]] ''Flavobacterium johnsoniae'' glucodextranase <cite>Nakamura2024</cite>
 *[[GH131]] ''Coprinopsis cinerea'' CcGH131A '''Family First''' <cite>Miyazaki2013b</cite>
@@ Line 85: / Line 83: @@
 #Nakamura2023 pmid=37269952
 #Ikegaya2023 pmid=37438884
 </biblio>
 <!-- Do not remove this Category tag -->
 [[Category:Contributors|Miyazaki,Takatsugu]]

@@ Line 20: / Line 20: @@
 *[[GH68]] ''Microbacterium saccharophilum'' β-fructofuranosidase <cite>Tonozuka2012</cite> and its thermostabilized mutants <cite>Ohta2014</cite>
 *[[GH92]] ''Enterococcus faecalis'' α-1,2-mannosidase (Michaelis complex) <cite>Alonso-Gil2022</cite>
 *[[GH131]] ''Coprinopsis cinerea'' CcGH131A '''Family First''' <cite>Miyazaki2013b</cite>

@@ Line 8: / Line 8: @@
 *[[GH27]] ''Arthrobacter globiformis'' isomalto-dextranase <cite>Okazawa2015</cite>
 *[[GH31]]_14 ''Pseudopedobacter saltans'' α-galactosidase '''Subfamily First''' <cite>Miyazaki2015a</cite>
 *[[GH31]]_15 ''Lactococcus lactis'' subsp. ''cremoris'' α-1,3-glucosidase '''Subfamily First''' <cite>Ikegaya2022</cite>
 *[[GH31]]_18 ''Enterococcus faecalis'' exo-acting protein-α-''N''-acetylgalactosaminidase '''Subfamily First''' <cite>Miyazaki2020b Miyazaki2022a</cite>
 *[[GH31]]_19 ''Bacteroides salyersiae'' and ''Flavihumibacter petaseus'' α-1,4-galactosidases '''Subfamily First''' <cite>Ikegaya2023</cite>
@@ Line 19: / Line 17: @@
 *[[GH63]] ''Thermus thermophillus'' mannosylglycerate hydrolase <cite>Miyazaki2015c</cite>
 *[[GH65]] ''Flavobacterium johnsoniae'' kojibiose hydrolase <cite>Nakamura2021 Nakamura2023</cite>
 *[[GH66]] ''Flavobacterium johnsoniae'' dextranase <cite>Nakamura2023</cite>
 *[[GH68]] ''Microbacterium saccharophilum'' β-fructofuranosidase <cite>Tonozuka2012</cite> and its thermostabilized mutants <cite>Ohta2014</cite>
 *[[GH92]] ''Enterococcus faecalis'' α-1,2-mannosidase (Michaelis complex) <cite>Alonso-Gil2022</cite>
 *[[GH131]] ''Coprinopsis cinerea'' CcGH131A '''Family First''' <cite>Miyazaki2013b</cite>
@@ Line 35: / Line 30: @@
 *[[GH31]] ''Flavobacterium johnsoniae'' dextranase <cite>Gozu2016 Nakamura2023</cite>
 *[[GH31]]_10 ''Paenibacillus'' sp. 598K 6-α-glucosyltransferase <cite>Ichinose2017</cite>
 *[[GH31]]_14 ''Pedobacter heparinus'' α-galactosidase <cite>Miyazaki2015a</cite>
 *[[GH31]]_15 ''Cordyceps militaris'' α-1,3-glucosidase <cite>Ikegaya2022</cite>
 *[[GH31]]_18 ''Bombyx mori'' exo-acting protein-α-''N''-acetylgalactosaminidase <cite>Ikegaya2021</cite>
 *[[GH63]] ''Aspergillus brasiliensis'' mannosyl-oligosaccharide glucosidase <cite>Miyazaki2011</cite>
 *[[GH65]] ''Microbacterium dextranolyticum'' dextran α-1,2-debranching enzyme <cite>Miyazaki2022b</cite>
@@ Line 48: / Line 39: @@
 *[[GT7]] ''Bombyx mori'' β-1,4-''N''-acetylgalactosaminyltransferase <cite>Miyazaki2019a</cite>
 *[[GT16]] ''Homo sapiens'' β-1,2-''N''-acetylglucosaminyltransferase II recombinantly expressed in ''Bombyx mori'' <cite>Miyazaki2018</cite>
 *[[GT16]] ''Bombyx mori'' β-1,2-''N''-acetylglucosaminyltransferase II <cite>Miyazaki2019b</cite>

@@ Line 12: / Line 12: @@
 *[[GH31]]_18 ''Enterococcus faecalis'' exo-acting protein-α-''N''-acetylgalactosaminidase '''Subfamily First''' <cite>Miyazaki2020b Miyazaki2022a</cite>
+*[[GH31]]_19 ''Bacteroides salyersiae'' and ''Flavihumibacter petaseus'' α-1,4-galactosidases '''Subfamily First''' <cite>Ikegaya2023</cite>
 *[[GH32]] ''Bombyx mori'' β-fructofuranosidase BmSUC1 <cite>Miyazaki2020c</cite>
 *[[GH49]] ''Aspergillus brasiliensis'' isopullulanase (''N''-glycan-deficient variant) <cite>Miyazaki2015b</cite>
@@ Line 88: / Line 88: @@
 #Miyazaki2019b pmid=30253927
 #Mori2016 pmid=34354475
 #Nakamura2023 pmid=37269952
+#Ikegaya2023 pmid=37438884
 </biblio>
 <!-- Do not remove this Category tag -->
 [[Category:Contributors|Miyazaki,Takatsugu]]

@@ Line 5: / Line 5: @@
 *[[GH6]] ''Coprinopsis cinerea'' cellobiohydrolase CcCel6A <cite>Tamura2012</cite>
 *[[GH13]]_17 ''Bombyx mori'' sucrose hydrolase BmSUH <cite>Miyazaki2020a</cite>
-*[[GH16]] ''Microbulbifer thermotolerans'' β-agarase <cite>Takagi2015</cite>
+*[[GH16]]_16 ''Microbulbifer thermotolerans'' β-agarase <cite>Takagi2015</cite>
 *[[GH27]] ''Arthrobacter globiformis'' isomalto-dextranase <cite>Okazawa2015</cite>
-*[[GH31]] ''Pseudopedobacter saltans'' α-galactosidase <cite>Miyazaki2015a</cite>
+*[[GH31]]_14 ''Pseudopedobacter saltans'' α-galactosidase <cite>Miyazaki2015a</cite>
-*[[GH31]] ''Enterococcus faecalis'' exo-acting protein-α-''N''-acetylgalactosaminidase <cite>Miyazaki2020b Miyazaki2022a</cite>
-*[[GH31]] ''Lactococcus lactis'' subsp. ''cremoris'' α-1,3-glucosidase <cite>Ikegaya2022</cite>
+*[[GH31]]_15 ''Lactococcus lactis'' subsp. ''cremoris'' α-1,3-glucosidase <cite>Ikegaya2022</cite>
 *[[GH32]] ''Bombyx mori'' β-fructofuranosidase BmSUC1 <cite>Miyazaki2020c</cite>
 *[[GH49]] ''Aspergillus brasiliensis'' isopullulanase (''N''-glycan-deficient variant) <cite>Miyazaki2015b</cite>
@@ Line 26: / Line 29: @@
 *[[GH29]] ''Bombyx mori'' α-L-fucosidase <cite>Nakamura2020</cite>
 *[[GH31]] ''Flavobacterium johnsoniae'' dextranase <cite>Gozu2016</cite>
-*[[GH31]] ''Paenibacillus'' sp. 598K 6-α-glucosyltransferase <cite>Ichinose2017</cite>
+*[[GH31]]_10 ''Paenibacillus'' sp. 598K 6-α-glucosyltransferase <cite>Ichinose2017</cite>
-*[[GH31]] ''Bombyx mori'' exo-acting protein-α-''N''-acetylgalactosaminidase <cite>Ikegaya2021</cite>
-*[[GH31]] ''Cordyceps militaris'' α-1,3-glucosidase <cite>Ikegaya2022</cite>
+*[[GH31]]_14 ''Pedobacter heparinus'' α-galactosidase <cite>Miyazaki2015a</cite>
 *[[GH63]] ''Aspergillus brasiliensis'' mannosyl-oligosaccharide glucosidase <cite>Miyazaki2011</cite>
 *[[GH65]] ''Microbacterium dextranolyticum'' dextran α-1,2-debranching enzyme <cite>Miyazaki2022b</cite>

@@ Line 1: / Line 1: @@
 [[Image:Takatsugu_Miyazaki.png|right]]
-Takatsugu Miyazaki is an Assistant Professor of [https://green.shizuoka.ac.jp/en/ Research Institute of Green Science and Technology] (RIGST) and [https://www.agr.shizuoka.ac.jp/en/ Department of Agriculture, Graduate School of Integrated Science and Technology], at [https://www.shizuoka.ac.jp/english/ Shizuoka University]. He obtained his PhD under the supervision of [[User:Takashi Tonozuka|Takashi Tonozuka]] at Tokyo University of Agriculture and Technology. He is interested in structures and functions of CAZymes, especially glycoside hydrolases and glycosyltransferases from microorganisms and insects. He has contributed to the crystal structure determination of
+Takatsugu Miyazaki is an Associate Professor of [https://green.shizuoka.ac.jp/en/ Research Institute of Green Science and Technology] (RIGST) and [https://www.agr.shizuoka.ac.jp/en/ Department of Agriculture, Graduate School of Integrated Science and Technology], at [https://www.shizuoka.ac.jp/english/ Shizuoka University]. He obtained his PhD under the supervision of [[User:Takashi Tonozuka|Takashi Tonozuka]] at Tokyo University of Agriculture and Technology. He is interested in structures and functions of CAZymes, especially glycoside hydrolases and glycosyltransferases from microorganisms and insects. He has contributed to the crystal structure determination of
 *[[GH6]] ''Coprinopsis cinerea'' cellobiohydrolase CcCel6C <cite>Liu2010</cite>

@@ Line 70: / Line 70: @@
 #Ikegaya2021 pmid=33742736
 #Miyazaki2011 pmid=22020441
-#Miyazaki2022b Miyazaki T, Tanaka H, Nakamura S, Dohra H, and Funane K. (2022). ''Identification and Characterization of Dextran α-1,2-Debranching Enzyme from Microbacterium dextranolyticum'', ''J Appl Glycosci'' in press. https://doi.org/10.5458/jag.jag.JAG-2022_0013
+#Miyazaki2022b pmid=37033117
 #Mizushima2019 pmid=31273396
 #Matsuda2011 pmid=21512220