User:Takayuki Ohnuma - Revision history

Harry Brumer: added GH19 link

2016-12-08T17:15:27Z

added GH19 link

Harry Brumer at 04:20, 2 December 2016

2016-12-02T04:20:55Z

Harry Brumer at 11:22, 26 May 2014

2014-05-26T11:22:22Z

Takayuki Ohnuma at 02:13, 26 May 2014

2014-05-26T02:13:32Z

Harry Brumer at 10:28, 24 May 2014

2014-05-24T10:28:25Z

Harry Brumer at 10:22, 24 May 2014

2014-05-24T10:22:18Z

Takayuki Ohnuma at 09:16, 22 May 2014

2014-05-22T09:16:12Z

Takayuki Ohnuma at 09:12, 22 May 2014

2014-05-22T09:12:41Z

Takayuki Ohnuma at 08:06, 22 May 2014

2014-05-22T08:06:31Z

Takayuki Ohnuma at 06:00, 22 May 2014

2014-05-22T06:00:04Z

@@ Line 1: / Line 1: @@
 [[File:Taka.jpg|200px|right]]
 Takayuki Ohnuma is an assistant professor at Department of Advanced Bioscience, Faculty of Agriculture, Kinki University located in Nara, Japan.
-He received his Ph.D. degree in 2002 from the Graduate School of Agriculture in Kyushu University. His research program currently focuses on the structures and functions of chitinolytic enzymes <cite>Ohnuma2011a Ohnuma2011b Ohnuma2011c Ohnuma2012 Ohnuma2013 Ohnuma2014</cite>, including their CBMs <cite>Ohnuma2008 Shinya2013</cite>. In 2013, He and his collaborators published the structure of a complex of rye family 19 chitinase with two molecules of (GlcNAc)<sub>4</sub> <cite>Ohnuma2013</cite>. This is the first report on the complete subsite mapping of a GH19 chitinase.
+He received his Ph.D. degree in 2002 from the Graduate School of Agriculture in Kyushu University. His research program currently focuses on the structures and functions of chitinolytic enzymes <cite>Ohnuma2011a Ohnuma2011b Ohnuma2011c Ohnuma2012 Ohnuma2013 Ohnuma2014</cite>, including their CBMs <cite>Ohnuma2008 Shinya2013</cite>. In 2013, He and his collaborators published the structure of a complex of rye [[Glycoside Hydrolase Family 19]] chitinase with two molecules of (GlcNAc)<sub>4</sub> <cite>Ohnuma2013</cite>. This is the first report on the complete subsite mapping of a [[GH19]] chitinase.

@@ Line 17: / Line 17: @@
 #Ohnuma2008 pmid=18083709
 #Shinya2013 pmid=23986450
 </biblio>
 [[Category:Contributors|Ohnuma, Takayuki]]

@@ Line 1: / Line 1: @@
-[[File:Taka.jpg|right|150px|caption]]Takayuki Ohnuma is an assistant professor at Department of Advanced Bioscience, Faculty of Agriculture, Kinki University located in Nara, Japan.
+[[File:Taka.jpg|200px|right]]
-He received PhD degree in 2002 from Graduate School of Agriculture in Kyushu University. His research program currently focuses on the structures and functions of chitinolytic enzymes<cite>Ohnuma2011a Ohnuma2011b Ohnuma2011c Ohnuma2012 Ohnuma2013 Ohnuma2014</cite>, including their CBMs<cite>Ohnuma2008 Shinya2013</cite>. In 2013, He and his colabolater published <cite>Ohnuma2013</cite> the structure of a complex of rye family 19 chitinase with two molecules of (GlcNAc)<sub>4</sub>. This is the first report on the complete subsite mapping of GH19 chitinase.
+Takayuki Ohnuma is an assistant professor at Department of Advanced Bioscience, Faculty of Agriculture, Kinki University located in Nara, Japan.
@@ Line 19: / Line 20: @@
 </biblio>
-−
 [[Category:Contributors|Ohnuma, Takayuki]]

@@ Line 1: / Line 1: @@
 [[File:Taka.jpg|right|150px|caption]]Takayuki Ohnuma is an assistant professor at Department of Advanced Bioscience, Faculty of Agriculture, Kinki University located in Nara, Japan.
-He received PhD degree in 2002 from Graduate School of Agriculture in Kyushu University. His research program currently focuses on the structures and functions of plant chitinases (GH18 and GH19), including their CBMs (CBM18 and CBM50), which are involved in plant self-defense against fungal pathogens <cite>Shinya2011 Umemoto2012</cite> ''Delete: [1-11]''. In 2013, He and his colabolater published <cite>Ohnuma2013</cite> the structure of a complex of rye family 19 chitinase with two molecules of (GlcNAc)<sub>4</sub>. This is the first report on the complete subsite mapping of GH19 chitinase.
+He received PhD degree in 2002 from Graduate School of Agriculture in Kyushu University. His research program currently focuses on the structures and functions of chitinolytic enzymes<cite>Ohnuma2011a Ohnuma2011b Ohnuma2011c Ohnuma2012 Ohnuma2013 Ohnuma2014</cite>, including their CBMs<cite>Ohnuma2008 Shinya2013</cite>. In 2013, He and his colabolater published <cite>Ohnuma2013</cite> the structure of a complex of rye family 19 chitinase with two molecules of (GlcNAc)<sub>4</sub>. This is the first report on the complete subsite mapping of GH19 chitinase.
@@ Line 8: / Line 8: @@
 <biblio>
 #Ohnuma2013 pmid=23871710
-#Shinya2011 pmid=21859795
+#Ohnuma2014 pmid=24582745
-#Umemoto2012 pmid=22484953
+#Ohnuma2008 pmid=18083709
 </biblio>
-−
 [[Category:Contributors|Ohnuma, Takayuki]]

@@ Line 1: / Line 1: @@
 [[File:Taka.jpg|right|150px|caption]]Takayuki Ohnuma is an assistant professor at Department of Advanced Bioscience, Faculty of Agriculture, Kinki University located in Nara, Japan.
-He received PhD degree in 2002 from Graduate School of Agriculture in Kyushu University. His research program currently focuses on the structures and functions of plant chitinases (GH18 and GH19), including their CBMs (CBM18 and CBM50), which are involved in plant self-defense against fungal pathogens [1-11]. In 2013, He and his colabolater published <cite>Ohnuma2013</cite> the structure of a complex of rye family 19 chitinase with two molecules of (GlcNAc)<sub>4</sub>. This is the first report on the complete subsite mapping of GH19 chitinase.
+He received PhD degree in 2002 from Graduate School of Agriculture in Kyushu University. His research program currently focuses on the structures and functions of plant chitinases (GH18 and GH19), including their CBMs (CBM18 and CBM50), which are involved in plant self-defense against fungal pathogens <cite>Shinya2011 Umemoto2012</cite> ''Delete: [1-11]''. In 2013, He and his colabolater published <cite>Ohnuma2013</cite> the structure of a complex of rye family 19 chitinase with two molecules of (GlcNAc)<sub>4</sub>. This is the first report on the complete subsite mapping of GH19 chitinase.
@@ Line 9: / Line 9: @@
 <biblio>
 #Ohnuma2013 pmid=23871710
 </biblio>

@@ Line 1: / Line 1: @@
 [[File:Taka.jpg|right|150px|caption]]Takayuki Ohnuma is an assistant professor at Department of Advanced Bioscience, Faculty of Agriculture, Kinki University located in Nara, Japan.
-He received PhD degree in 2002 from Graduate School of Agriculture in Kyushu University. His research program currently focuses on the structures and functions of plant chitinases (GH18 and GH19), including their CBMs (CBM18 and CBM50), which are involved in plant self-defense against fungal pathogens [1-11]. In 2013, He and his colabolater published [2] the structure of a complex of rye family 19 chitinase with two molecules of (GlcNAc)<sub>4</sub>. This is the first report on the complete subsite mapping of GH19 chitinase.
+He received PhD degree in 2002 from Graduate School of Agriculture in Kyushu University. His research program currently focuses on the structures and functions of plant chitinases (GH18 and GH19), including their CBMs (CBM18 and CBM50), which are involved in plant self-defense against fungal pathogens [1-11]. In 2013, He and his colabolater published <cite>Ohnuma2013</cite> the structure of a complex of rye family 19 chitinase with two molecules of (GlcNAc)<sub>4</sub>. This is the first report on the complete subsite mapping of GH19 chitinase.
@@ Line 7: / Line 7: @@
 References
 # Ohnuma T, Umemoto N, Nagata T, Shinya S, Numata T, Taira T, Fukamizo T. Crystal structure of a "loopless" GH19 chitinase in complex with chitin tetrasaccharide spanning the catalytic center. ''Biochim Biophys Acta'', 1844, 793-802 (2014)
 # Ohnuma T, Umemoto N, Kondo K, Numata T, Fukamizo T. Complete subsite mapping of a "loopful" GH19 chitinase from rye seeds based on its crystal structure. ''FEBS Lett'', 587, 2691-7 (2013)

← Older revision		Revision as of 09:16, 22 May 2014
Line 1:		Line 1:
	[[File:Taka.jpg\|right\|150px\|caption]]Takayuki Ohnuma is an assistant professor at Department of Advanced Bioscience, Faculty of Agriculture, Kinki University located in Nara, Japan.		[[File:Taka.jpg\|right\|150px\|caption]]Takayuki Ohnuma is an assistant professor at Department of Advanced Bioscience, Faculty of Agriculture, Kinki University located in Nara, Japan.
−	He received PhD degree in 2002 from Graduate School of Agriculture in Kyushu University. His research program currently focuses on the structures and functions of plant chitinases (GH18 and GH19), including their CBMs (CBM18 and CBM50), which are involved in plant self-defense against fungal pathogens. In 2013, He and his colabolater published [9] the structure of a complex of rye family 19 chitinase with two molecules of (GlcNAc)4. This is the first report on the complete subsite mapping of GH19 chitinase.	+	He received PhD degree in 2002 from Graduate School of Agriculture in Kyushu University. His research program currently focuses on the structures and functions of plant chitinases (GH18 and GH19), including their CBMs (CBM18 and CBM50), which are involved in plant self-defense against fungal pathogens [1-11]. In 2013, He and his colabolater published [2] the structure of a complex of rye family 19 chitinase with two molecules of (GlcNAc)<sub>4</sub>. This is the first report on the complete subsite mapping of GH19 chitinase.

@@ Line 1: / Line 1: @@
-[[Image:Taka.jpg|thumb|widthpx| ]]Takayuki Ohnuma is an assistant professor at Department of Advanced Bioscience, Faculty of Agriculture, Kinki University located in Nara, Japan.
+[[File:Taka.jpg|right|150px|caption]]Takayuki Ohnuma is an assistant professor at Department of Advanced Bioscience, Faculty of Agriculture, Kinki University located in Nara, Japan.
 He received PhD degree in 2002 from Graduate School of Agriculture in Kyushu University. His research program currently focuses on the structures and functions of plant chitinases (GH18 and GH19), including their CBMs (CBM18 and CBM50), which are involved in plant self-defense against fungal pathogens. In 2013, He and his colabolater published [9] the structure of a complex of rye family 19 chitinase with two molecules of (GlcNAc)4. This is the first report on the complete subsite mapping of GH19 chitinase.
 References
-.        Ohnuma T, Umemoto N, Nagata T, Shinya S, Numata T, Taira T, Fukamizo T. Crystal structure of a "loopless" GH19 chitinase in complex with chitin tetrasaccharide spanning the catalytic center. Biochim Biophys Acta, 1844, 793-802 (2014)
+# Ohnuma T, Umemoto N, Nagata T, Shinya S, Numata T, Taira T, Fukamizo T. Crystal structure of a "loopless" GH19 chitinase in complex with chitin tetrasaccharide spanning the catalytic center. ''Biochim Biophys Acta'', 1844, 793-802 (2014)
+# Ohnuma T, Umemoto N, Kondo K, Numata T, Fukamizo T. Complete subsite mapping of a "loopful" GH19 chitinase from rye seeds based on its crystal structure. ''FEBS Lett'', 587, 2691-7 (2013)
-.        Ohnuma T, Umemoto N, Kondo K, Numata T, Fukamizo T. Complete subsite mapping of a "loopful" GH19 chitinase from rye seeds based on its crystal structure. FEBS Lett, 587, 2691-7 (2013)
+# Ohnuma T, Taira T, Fukamizo T. Antifungal activity of recombinant class V chitinases from ''Nicotiana tabacum'' and ''Arabidopsis thaliana''. ''J Appl Glycosci'', 59, 1, 47-50 (2012)
+# Umemoto N, Ohnuma T, Mizuhara M, Sato H, Skriver K, Fukamizo T. Introduction of a tryptophan side chain into subsite +1 enhances transglycosylation activity of a GH-18 chitinase from ''Arabidopsis thaliana'', AtChiC. ''Glycobiology'', 23, 81-90 (2013)
-.        Ohnuma T, Taira T, Fukamizo T. Antifungal activity of recombinant class V chitinases from Nicotiana tabacum and Arabidopsis thaliana. J Appl Glycosci, 59, 1, 47-50 (2012)
+# Ohnuma T, Numata T, Osawa T, Inanaga H, Okazaki Y, Shinya S, Kondo K, Fukuda T, Fukamizo T. Crystal structure and chitin oligosaccharide-binding mode of a 'loopful' family GH19 chitinase from rye, ''Secale cereale'', seeds. ''FEBS J'', 19, 3639-3651 (2012)
+# Umemoto N, Ohnuma T, Urpilainen H, Yamamoto T, Numata T, Fukamizo T. Role of tryptophan residues in a class V chitinase from ''Nicotiana tabacum''. ''Biosci Biotechnol Biochem'', 76,778-784 (2012)
-.        Umemoto N, Ohnuma T, Mizuhara M, Sato H, Skriver K, Fukamizo T. Introduction of a tryptophan side chain into subsite +1 enhances transglycosylation activity of a GH-18 chitinase from Arabidopsis thaliana, AtChiC. Glycobiology, 23, 81-90 (2013)
+# Ohnuma T, Fukuda T, Dozen S, Honda Y, Kitaoka M, Fukamizo T. A glycosynthase derived from an inverting GH19 chitinase from the moss ''Bryum coronatum''. ''Biochem J'', 444, 437-443 (2012)
+# Shinya S, Ohnuma T, Kawamura S, Torikata T, Nishimura S, Katoh E, Fukamizo T. Interaction of a goose-type lysozyme with chitin oligosaccharides as determined by NMR spectroscopy. ''J Biochem'', 150, 569-577 (2011)
-.        Ohnuma T, Numata T, Osawa T, Inanaga H, Okazaki Y, Shinya S, Kondo K, Fukuda T, Fukamizo T. Crystal structure and chitin oligosaccharide-binding mode of a 'loopful' family GH19 chitinase from rye, Secale cereale, seeds. FEBS J, 19, 3639-3651 (2012)
+# Ohnuma T, Sørlie M, Fukuda T, Kawamoto N, Taira T, Fukamizo T. Chitin oligosaccharide binding to a family GH19 chitinase from the moss ''Bryum coronatum''. ''FEBS J'', 278, 3991-4001 (2011)
+# Ohnuma T, Numata T, Osawa T, Mizuhara M, Lampela O, Juffer AH, Skriver K, Fukamizo T. A class V chitinase from ''Arabidopsis thaliana'': gene responses, enzymatic properties, and crystallographic analysis. ''Planta'', 234, 123-137 (2011)
-.        Umemoto N, Ohnuma T, Urpilainen H, Yamamoto T, Numata T, Fukamizo T. Role of tryptophan residues in a class V chitinase from Nicotiana tabacum. Biosci Biotechnol Biochem, 76,778-784 (2012)
+# Ohnuma T, Numata T, Osawa T, Mizuhara M, Vårum KM, Fukamizo T. Crystal structure and mode of action of a class V chitinase from ''Nicotiana tabacum''. ''Plant Mol Biol'', 75, 291-304 (2011)
 [[Category:Contributors|Ohnuma, Takayuki]]

@@ Line 1: / Line 1: @@
-Takayuki Ohnuma is an assistant professor at Department of Advanced Bioscience, Faculty of Agriculture, Kinki University located in Nara, Japan.
+[[Image:Taka.jpg|thumb|widthpx| ]]Takayuki Ohnuma is an assistant professor at Department of Advanced Bioscience, Faculty of Agriculture, Kinki University located in Nara, Japan.
-[[File:Taka.jpg]]He received PhD degree in 2002 from Graduate School of Agriculture in Kyushu University. His research program currently focuses on the structures and functions of plant chitinases (GH18 and GH19), including their CBMs (CBM18 and CBM50), which are involved in plant self-defense against fungal pathogens. In 2013, He and his colabolater published [9] the structure of a complex of rye family 19 chitinase with two molecules of (GlcNAc)4. This is the first report on the complete subsite mapping of GH19 chitinase.
+He received PhD degree in 2002 from Graduate School of Agriculture in Kyushu University. His research program currently focuses on the structures and functions of plant chitinases (GH18 and GH19), including their CBMs (CBM18 and CBM50), which are involved in plant self-defense against fungal pathogens. In 2013, He and his colabolater published [9] the structure of a complex of rye family 19 chitinase with two molecules of (GlcNAc)4. This is the first report on the complete subsite mapping of GH19 chitinase.
@@ Line 11: / Line 11: @@
 .        Ohnuma T, Taira T, Fukamizo T. Antifungal activity of recombinant class V chitinases from Nicotiana tabacum and Arabidopsis thaliana. J Appl Glycosci, 59, 1, 47-50 (2012)
-.        Umemoto N*, Ohnuma T*, Mizuhara M, Sato H, Skriver K, Fukamizo T. Introduction of a tryptophan side chain into subsite +1 enhances transglycosylation activity of a GH-18 chitinase from Arabidopsis thaliana, AtChiC. Glycobiology, 23, 81-90 (2013) (*equally contributed)
+.        Umemoto N, Ohnuma T, Mizuhara M, Sato H, Skriver K, Fukamizo T. Introduction of a tryptophan side chain into subsite +1 enhances transglycosylation activity of a GH-18 chitinase from Arabidopsis thaliana, AtChiC. Glycobiology, 23, 81-90 (2013)
 .        Ohnuma T, Numata T, Osawa T, Inanaga H, Okazaki Y, Shinya S, Kondo K, Fukuda T, Fukamizo T. Crystal structure and chitin oligosaccharide-binding mode of a 'loopful' family GH19 chitinase from rye, Secale cereale, seeds. FEBS J, 19, 3639-3651 (2012)
-.        Umemoto N*, Ohnuma T*, Urpilainen H, Yamamoto T, Numata T, Fukamizo T. Role of tryptophan residues in a class V chitinase from Nicotiana tabacum. Biosci Biotechnol Biochem, 76,778-784 (2012) (equally contributed)
+.        Umemoto N, Ohnuma T, Urpilainen H, Yamamoto T, Numata T, Fukamizo T. Role of tryptophan residues in a class V chitinase from Nicotiana tabacum. Biosci Biotechnol Biochem, 76,778-784 (2012)
 .         Ohnuma T, Fukuda T, Dozen S, Honda Y, Kitaoka M, Fukamizo T. A glycosynthase derived from an inverting GH19 chitinase from the moss Bryum coronatum. Biochem J, 444, 437-443 (2012)
-.        Shinya S*, Ohnuma T*, Kawamura S, Torikata T, Nishimura S, Katoh E, Fukamizo T. Interaction of a goose-type lysozyme with chitin oligosaccharides as determined by NMR spectroscopy. J Biochem, 150, 569-577 (2011) (*equally contributed)
+.        Shinya S, Ohnuma T, Kawamura S, Torikata T, Nishimura S, Katoh E, Fukamizo T. Interaction of a goose-type lysozyme with chitin oligosaccharides as determined by NMR spectroscopy. J Biochem, 150, 569-577 (2011)
 .        Ohnuma T, Sørlie M, Fukuda T, Kawamoto N, Taira T, Fukamizo T. Chitin oligosaccharide binding to a family GH19 chitinase from the moss Bryum coronatum. FEBS J, 278, 3991-4001 (2011)
@@ Line 25: / Line 24: @@
 .    Ohnuma T, Numata T, Osawa T, Mizuhara M, Lampela O, Juffer AH, Skriver K, Fukamizo T. A class V chitinase from Arabidopsis thaliana: gene responses, enzymatic properties, and crystallographic analysis. Planta, 234, 123-137 (2011)
-.    Ohnuma T, Numata T, Osawa T, Mizuhara M, Vårum KM, Fukamizo T. Crystal structure and mode of action of a class V chitinase from Nicotiana tabacum. Plant Mol Biol, 75, 291-304 (2011)        Normal  0  false      0  2    false  false  false    EN-US  JA  X-NONE
+.    Ohnuma T, Numata T, Osawa T, Mizuhara M, Vårum KM, Fukamizo T. Crystal structure and mode of action of a class V chitinase from Nicotiana tabacum. Plant Mol Biol, 75, 291-304 (2011)
 [[Category:Contributors|Ohnuma, Takayuki]]

← Older revision		Revision as of 06:00, 22 May 2014
Line 1:		Line 1:
−	~~[[Image:filename\|thumb\|widthpx\| ]]~~Takayuki Ohnuma is an assistant professor at Department of Advanced Bioscience, Faculty of Agriculture, Kinki University located in Nara, Japan. He received PhD degree in 2002 from Graduate School of Agriculture in Kyushu University. His research program currently focuses on the structures and functions of plant chitinases (GH18 and GH19), including their CBMs (CBM18 and CBM50), which are involved in plant self-defense against fungal pathogens. In 2013, He and his colabolater published [9] the structure of a complex of rye family 19 chitinase with two molecules of (GlcNAc)4. This is the first report on the complete subsite mapping of GH19 chitinase.	+	Takayuki Ohnuma is an assistant professor at Department of Advanced Bioscience, Faculty of Agriculture, Kinki University located in Nara, Japan.
		+	[[File:Taka.jpg]]He received PhD degree in 2002 from Graduate School of Agriculture in Kyushu University. His research program currently focuses on the structures and functions of plant chitinases (GH18 and GH19), including their CBMs (CBM18 and CBM50), which are involved in plant self-defense against fungal pathogens. In 2013, He and his colabolater published [9] the structure of a complex of rye family 19 chitinase with two molecules of (GlcNAc)4. This is the first report on the complete subsite mapping of GH19 chitinase.