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Difference between revisions of "Glycoside Hydrolase Family 37"

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== Substrate specificities ==
 
== Substrate specificities ==
GH37 [[glycoside hydrolases]] have been shown, to date, to hydrolyse only the disaccharide trehalose (α-D-glucopyranosyl-(1→1)-α-D-glucopyranoside) into two molecules of D-glucose (EC [{{EClink}}3.2.1.28 3.2.1.28]).
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To date, GH37 [[glycoside hydrolases]] have been shown to hydrolyze the α-1,1 bound trehalose (α-D-glucopyranosyl-(1→1)-α-D-glucopyranoside) into two molecules of D-glucose (EC [{{EClink}}3.2.1.28 3.2.1.28]). GH37 enzymes are further classified by their optimal pH; neutral or acidic, and also by their cellular localization; soluble or membrane bound <cite>DEnfert1999</cite>.
  
 
== Kinetics and Mechanism ==
 
== Kinetics and Mechanism ==
A trehalase from flesh fly was shown to hydrolyse with [[inverting|inversion]] of anomeric stereochemistry using <sup>18</sup>O-labelled water <cite>Clifford1980</cite>. The structural solution of the trehalase from ''Escherichia coli'' also demonstrates the active site catalytic residues are in a position consistent with an [[inverting]] mechanism <cite>Gibson2007</cite>.
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GH37 trehalases follow an [[inverting]] mechanism. This was first demonstrated through incubation of GH37 trehalases obtained from ''S. barbata'', the flesh fly, with <sup>18</sup>O-labelled water and observing its incorporation primarily into the beta-epimer <cite>Clifford1980</cite>. This was further supported by the solved structure of ''E. coli'' Tre37A which demonstrated that the proposed catalytic residues were in a position consistent with an [[inverting]] mechanism <cite>Gibson2007</cite>.
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Several fungal neutral trehalases; ''S. cerevisiae'', ''A. nidulans'', ''N. crassa'', and ''C. albicans'', show evidence of activation by calcium ion binding and cAMP-dependent phosphorylation <cite>DEnfert1999 Alblova2017 Alblova2019</cite>.  
  
 
== Catalytic Residues ==
 
== Catalytic Residues ==
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== References ==
 
== References ==
 
<biblio>
 
<biblio>
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#DEnfert1999 pmid=10320571
 
#Clifford1980 pmid=7341233
 
#Clifford1980 pmid=7341233
 
#Gibson2007 pmid=17455176
 
#Gibson2007 pmid=17455176
 +
#Alblova2017 pmid=29087344
 +
#Alblova2019 pmid=30628830
 +
 
#Cardona2009 pmid=19123216
 
#Cardona2009 pmid=19123216
 
#Cardona2010 pmid=20461849  
 
#Cardona2010 pmid=20461849  

Revision as of 13:19, 8 September 2021

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Glycoside Hydrolase Family GH37
Clan GH-G
Mechanism Inverting
Active site residues Inferred
CAZy DB link
https://www.cazy.org/GH37.html


Substrate specificities

To date, GH37 glycoside hydrolases have been shown to hydrolyze the α-1,1 bound trehalose (α-D-glucopyranosyl-(1→1)-α-D-glucopyranoside) into two molecules of D-glucose (EC 3.2.1.28). GH37 enzymes are further classified by their optimal pH; neutral or acidic, and also by their cellular localization; soluble or membrane bound [1].

Kinetics and Mechanism

GH37 trehalases follow an inverting mechanism. This was first demonstrated through incubation of GH37 trehalases obtained from S. barbata, the flesh fly, with 18O-labelled water and observing its incorporation primarily into the beta-epimer [2]. This was further supported by the solved structure of E. coli Tre37A which demonstrated that the proposed catalytic residues were in a position consistent with an inverting mechanism [3].

Several fungal neutral trehalases; S. cerevisiae, A. nidulans, N. crassa, and C. albicans, show evidence of activation by calcium ion binding and cAMP-dependent phosphorylation [1, 4, 5].

Catalytic Residues

The catalytic residues have not been demonstrated unequivocally, but structural determination of the trehalase from Escherichia coli in complex with inhibitors in the active site implicate an aspartate residue (Asp312 in E. coli) as the catalytic general acid and a glutamate residue (Glu496 in E. coli) as the catalytic general base [3].

Three-dimensional structures

The only structural representative from GH37 to date is the trehalase from Escherichia coli, which was solved using X-ray crystallography [3]. The structure revealed a (α/α)6 barrel fold, similar to other α-toroidal glycosidases such as those in families GH94, GH15 and GH65. GH37 falls into clan GH-G. Structures have been solved with the inhibitors validoxylamine A, 1-thiatrehazolin and casuarine analogues [3, 6, 7].

Family Firsts

First sterochemistry determination
The inversion of stereochemistry for a trehalase from the flesh fly Sarcophaga barbata was first demonstrated by Clifford in 1980 [2].
First general acid identification
Predicted from structure determination [3], but not shown unequivocally.
First general base identification
Predicted from structure determination [3], but not shown unequivocally.
First 3-D structure
The GH37 trehalase from Escherichia coli was solved by X-ray crystallography [3].

References

Error fetching PMID 10320571:
Error fetching PMID 7341233:
Error fetching PMID 17455176:
Error fetching PMID 29087344:
Error fetching PMID 30628830:
Error fetching PMID 19123216:
Error fetching PMID 20461849:
  1. Error fetching PMID 10320571: [DEnfert1999]
  2. Error fetching PMID 7341233: [Clifford1980]
  3. Error fetching PMID 17455176: [Gibson2007]
  4. Error fetching PMID 29087344: [Alblova2017]
  5. Error fetching PMID 30628830: [Alblova2019]
  6. Error fetching PMID 19123216: [Cardona2009]
  7. Error fetching PMID 20461849: [Cardona2010]

All Medline abstracts: PubMed