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Difference between revisions of "Glycoside Hydrolase Family 22"

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== Substrate specificities ==
 
== Substrate specificities ==
Content is to be added here. In the meantime, please see these references for an essential introduction to the CAZy classification system: <cite>DaviesSinnott2008 Cantarel2009</cite>.
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[[Glycoside hydrolase]] family 22 contains proteins with two main functions: lysozymes and α-lactalbumin.
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Lysozymes catalyse the hydrolysis of (1→4)-β-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in peptidoglycan and between ‘’N’’-acetyl-D-glucosamine residues in chitooligosaccharides. Lysozymes are also referred to as muramidase. Lysozymes from family GH22 are classified as c-type lysozymes (c = chicken), to distinguish them from lysozymes of family GH23, which are sometimes referred to as g-type (g = goose) lysozymes. Lysozymes are antibacterial lytic proteins, protecting against bacterial infection through their ability to degrade the bacterial cell wall. Human lysozyme is abundant in secretions including tears, saliva, milk and in mucus.    Human lysozyme defects can result in a rare hereditary condition, amyloidosis VIII, in which lysozyme deposits as amyloid.
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α-Lactalbumins are auxiliary proteins that modify the substrate specificity of galactosyltransferase, converting it to lactose synthase. It is believed that α-lactalbumins evolved at the outset of mammalian evolution, after divergence of mammalian and avian lineages.
  
 
== Kinetics and Mechanism ==
 
== Kinetics and Mechanism ==
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== Catalytic Residues ==
 
== Catalytic Residues ==
Content is to be added here.
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HEWL operates through a [[Koshland retaining mechanism]] involving a covalent glycosyl enzyme intermediate. Asp52 functions as the [[catalytic nucleophile]], as shown by X-ray crystallographic observation of a covalent bond for the 2-fluoroglycosyl enzyme formed on the E35Q mutant of HEWL using ‘’N’’-acetylglucosaminyl-1,4-2-deoxy-2-fluoroglycosyl fluoride, and by mass spectrometric observation of a covalent adduct of the same complex <cite>Vocadlo2001</cite>.
 
 
  
 
== Three-dimensional structures ==
 
== Three-dimensional structures ==
Content is to be added here.
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The first structure of a GH22 member was that of hen egg white lysozyme (HEWL) <cite>Blake1965</cite>. In fact, HEWL was the first enzyme to have its structure determined and attracted great interest as it provided a molecular view of enzyme catalysis.
 
 
  
 
== Family Firsts ==
 
== Family Firsts ==
 
;First sterochemistry determination: Cite some reference here, with a ''short'' (1-2 sentence) explanation <cite>Comfort2007</cite>.
 
;First sterochemistry determination: Cite some reference here, with a ''short'' (1-2 sentence) explanation <cite>Comfort2007</cite>.
;First catalytic nucleophile identification: Cite some reference here, with a ''short'' (1-2 sentence) explanation <cite>MikesClassic</cite>.
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;First catalytic nucleophile identification: Asp52 of hen egg white lysozyme (HEWL), by X-ray crystallography of covalent complex formed with a 2-fluorosugar <cite>Vocadlo2001</cite>.
 
;First general acid/base residue identification: Cite some reference here, with a ''short'' (1-2 sentence) explanation <cite>He1999</cite>.
 
;First general acid/base residue identification: Cite some reference here, with a ''short'' (1-2 sentence) explanation <cite>He1999</cite>.
;First 3-D structure: Cite some reference here, with a ''short'' (1-2 sentence) explanation <cite>3</cite>.
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;First 3-D structure: Hen egg-white lysozyme (HEWL) was the first glycosidase, and the first enzyme, to have its three-dimensional structure determined by X-ray diffraction techniques <cite>Blake1965</cite>.
 
 
 
== References ==
 
== References ==
 
<biblio>
 
<biblio>
#Cantarel2009 pmid=18838391
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#Blake1965 pmid= 5891407
#DaviesSinnott2008 Davies, G.J. and Sinnott, M.L. (2008) Sorting the diverse: the sequence-based classifications of carbohydrate-active enzymes. ''The Biochemist'', vol. 30, no. 4., pp. 26-32. [http://www.biochemist.org/bio/03004/0026/030040026.pdf Download PDF version].
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#Vocadlo2001 pmid=11518970
 
</biblio>
 
</biblio>
  
 
[[Category:Glycoside Hydrolase Families|GH022]]
 
[[Category:Glycoside Hydrolase Families|GH022]]

Revision as of 17:54, 27 March 2017

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This page is currently under construction. This means that the Responsible Curator has deemed that the page's content is not quite up to CAZypedia's standards for full public consumption. All information should be considered to be under revision and may be subject to major changes.


Glycoside Hydrolase Family GH22
Clan none, lysozyme-type fold
Mechanism retaining
Active site residues known
CAZy DB link
http://www.cazy.org/GH22.html


Substrate specificities

Glycoside hydrolase family 22 contains proteins with two main functions: lysozymes and α-lactalbumin.

Lysozymes catalyse the hydrolysis of (1→4)-β-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in peptidoglycan and between ‘’N’’-acetyl-D-glucosamine residues in chitooligosaccharides. Lysozymes are also referred to as muramidase. Lysozymes from family GH22 are classified as c-type lysozymes (c = chicken), to distinguish them from lysozymes of family GH23, which are sometimes referred to as g-type (g = goose) lysozymes. Lysozymes are antibacterial lytic proteins, protecting against bacterial infection through their ability to degrade the bacterial cell wall. Human lysozyme is abundant in secretions including tears, saliva, milk and in mucus. Human lysozyme defects can result in a rare hereditary condition, amyloidosis VIII, in which lysozyme deposits as amyloid.

α-Lactalbumins are auxiliary proteins that modify the substrate specificity of galactosyltransferase, converting it to lactose synthase. It is believed that α-lactalbumins evolved at the outset of mammalian evolution, after divergence of mammalian and avian lineages.

Kinetics and Mechanism

Content is to be added here.


Catalytic Residues

HEWL operates through a Koshland retaining mechanism involving a covalent glycosyl enzyme intermediate. Asp52 functions as the catalytic nucleophile, as shown by X-ray crystallographic observation of a covalent bond for the 2-fluoroglycosyl enzyme formed on the E35Q mutant of HEWL using ‘’N’’-acetylglucosaminyl-1,4-2-deoxy-2-fluoroglycosyl fluoride, and by mass spectrometric observation of a covalent adduct of the same complex [1].

Three-dimensional structures

The first structure of a GH22 member was that of hen egg white lysozyme (HEWL) [2]. In fact, HEWL was the first enzyme to have its structure determined and attracted great interest as it provided a molecular view of enzyme catalysis.

Family Firsts

First sterochemistry determination
Cite some reference here, with a short (1-2 sentence) explanation [3].
First catalytic nucleophile identification
Asp52 of hen egg white lysozyme (HEWL), by X-ray crystallography of covalent complex formed with a 2-fluorosugar [1].
First general acid/base residue identification
Cite some reference here, with a short (1-2 sentence) explanation [4].
First 3-D structure
Hen egg-white lysozyme (HEWL) was the first glycosidase, and the first enzyme, to have its three-dimensional structure determined by X-ray diffraction techniques [2].

References

  1. Vocadlo DJ, Davies GJ, Laine R, and Withers SG. (2001). Catalysis by hen egg-white lysozyme proceeds via a covalent intermediate. Nature. 2001;412(6849):835-8. DOI:10.1038/35090602 | PubMed ID:11518970 [Vocadlo2001]
  2. pmid= 5891407

    [Blake1965]