CAZypedia needs your help! We have many unassigned GH, PL, CE, AA, GT, and CBM pages in need of Authors and Responsible Curators.
Scientists at all career stages, including students, are welcome to contribute to CAZypedia. Read more here, and in the 10th anniversary article in Glycobiology.
New to the CAZy classification? Read this first.
*
Consider attending the 15th Carbohydrate Bioengineering Meeting in Ghent, 5-8 May 2024.
Difference between revisions of "User:Zui Fujimoto"
Jump to navigation
Jump to search
Harry Brumer (talk | contribs) (fixed some references to use Biblio) |
Zui Fujimoto (talk | contribs) |
||
| Line 5: | Line 5: | ||
* GH10 endo-1,4-β-xylanase <cite>Fujimoto2000</cite> | * GH10 endo-1,4-β-xylanase <cite>Fujimoto2000</cite> | ||
* GH13 α-amylase <cite>Fujimoto1998 Suvd2001</cite> | * GH13 α-amylase <cite>Fujimoto1998 Suvd2001</cite> | ||
| − | * GH27 α-galactosidase | + | * GH27 α-galactosidase <cite>Fujimoto2003 Fujimoto2009</cite> and β-L-arabinopyranosidase <cite>Ichinose2009</cite> |
| − | * GH43 exo-1,5-α-L-arabinofuranosidase | + | * GH43 exo-1,5-α-L-arabinofuranosidase <cite>Fujimoto2010</cite> |
| − | * GH66 dextranase | + | * GH66 dextranase <cite>Suzuki2012</cite> and cycloisomaltooligosaccharide glucanotransferase |
| − | * GH79 β-glucuronidase | + | * GH79 β-glucuronidase <cite>Michikawa2012</cite> |
| − | * GT5 starch synthase | + | * GT5 starch synthase <cite>Momma2012</cite> |
| Line 17: | Line 17: | ||
#Fujimoto1998 pmid=9514750 | #Fujimoto1998 pmid=9514750 | ||
#Suvd2001 pmid=11226887 | #Suvd2001 pmid=11226887 | ||
| − | + | #Fujimoto2003 pmid=12657636 | |
| + | #Fujimoto2009 pmid=19809163 | ||
| + | #Ichinose2009 pmid=19608743 | ||
| + | #Fujimoto2010 pmid=20739278 | ||
| + | #Suzuki2012 pmid=22337884 | ||
| + | #Michikawa2012 pmid=22367201 | ||
| + | #Momma2012 pmid=22878205 | ||
</biblio> | </biblio> | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
Revision as of 18:54, 7 November 2012
Zui FUJIMOTO is a research scientist in National Institute of Agrobiological Sciences, Japan. He received his Ph.D. from the Graduate School of Agricultural and Life Sciences, The University of Tokyo. His research interests are the structural insights into protein functions of agricultural and food chemical use. He has determined the crystal structures of
- GH10 endo-1,4-β-xylanase [1]
- GH13 α-amylase [2, 3]
- GH27 α-galactosidase [4, 5] and β-L-arabinopyranosidase [6]
- GH43 exo-1,5-α-L-arabinofuranosidase [7]
- GH66 dextranase [8] and cycloisomaltooligosaccharide glucanotransferase
- GH79 β-glucuronidase [9]
- GT5 starch synthase [10]
- Fujimoto Z, Kuno A, Kaneko S, Yoshida S, Kobayashi H, Kusakabe I, and Mizuno H. (2000). Crystal structure of Streptomyces olivaceoviridis E-86 beta-xylanase containing xylan-binding domain. J Mol Biol. 2000;300(3):575-85. DOI:10.1006/jmbi.2000.3877 |
- Fujimoto Z, Takase K, Doui N, Momma M, Matsumoto T, and Mizuno H. (1998). Crystal structure of a catalytic-site mutant alpha-amylase from Bacillus subtilis complexed with maltopentaose. J Mol Biol. 1998;277(2):393-407. DOI:10.1006/jmbi.1997.1599 |
- Suvd D, Fujimoto Z, Takase K, Matsumura M, and Mizuno H. (2001). Crystal structure of Bacillus stearothermophilus alpha-amylase: possible factors determining the thermostability. J Biochem. 2001;129(3):461-8. DOI:10.1093/oxfordjournals.jbchem.a002878 |
- Fujimoto Z, Kaneko S, Momma M, Kobayashi H, and Mizuno H. (2003). Crystal structure of rice alpha-galactosidase complexed with D-galactose. J Biol Chem. 2003;278(22):20313-8. DOI:10.1074/jbc.M302292200 |
- Fujimoto Z, Kaneko S, Kim WD, Park GG, Momma M, and Kobayashi H. (2009). The tetramer structure of the glycoside hydrolase family 27 alpha-galactosidase I from Umbelopsis vinacea. Biosci Biotechnol Biochem. 2009;73(10):2360-4. DOI:10.1271/bbb.90604 |
- Ichinose H, Fujimoto Z, Honda M, Harazono K, Nishimoto Y, Uzura A, and Kaneko S. (2009). A beta-l-Arabinopyranosidase from Streptomyces avermitilis is a novel member of glycoside hydrolase family 27. J Biol Chem. 2009;284(37):25097-106. DOI:10.1074/jbc.M109.022723 |
- Fujimoto Z, Ichinose H, Maehara T, Honda M, Kitaoka M, and Kaneko S. (2010). Crystal structure of an Exo-1,5-{alpha}-L-arabinofuranosidase from Streptomyces avermitilis provides insights into the mechanism of substrate discrimination between exo- and endo-type enzymes in glycoside hydrolase family 43. J Biol Chem. 2010;285(44):34134-43. DOI:10.1074/jbc.M110.164251 |
- Suzuki N, Kim YM, Fujimoto Z, Momma M, Okuyama M, Mori H, Funane K, and Kimura A. (2012). Structural elucidation of dextran degradation mechanism by streptococcus mutans dextranase belonging to glycoside hydrolase family 66. J Biol Chem. 2012;287(24):19916-26. DOI:10.1074/jbc.M112.342444 |
- Michikawa M, Ichinose H, Momma M, Biely P, Jongkees S, Yoshida M, Kotake T, Tsumuraya Y, Withers SG, Fujimoto Z, and Kaneko S. (2012). Structural and biochemical characterization of glycoside hydrolase family 79 β-glucuronidase from Acidobacterium capsulatum. J Biol Chem. 2012;287(17):14069-77. DOI:10.1074/jbc.M112.346288 |
- Momma M and Fujimoto Z. (2012). Interdomain disulfide bridge in the rice granule bound starch synthase I catalytic domain as elucidated by X-ray structure analysis. Biosci Biotechnol Biochem. 2012;76(8):1591-5. DOI:10.1271/bbb.120305 |