User talk:Harry Brumer/BiblioTest

This page is to demonstrate/test references with PubMed data that cause Biblio to choke.

---

Text

GH115 enzymes remove glucuronic acid from the both terminal and internal regions of xylooligosaccharides and xylans [1].

This substrate specificity was first demonstrated by an alpha-glucuronidase purified from Thermoascus aurantiacus [2], and later for a Schizophyllum commune alpha-glucuronidase [3].

Although GH115 was established on the basis of biochemical and sequence analysis of Pichia stipitis (4-O-methyl)-alpha-glucuronidase [1], available N-terminal protein sequence of the S. commune enzyme [3] allowed the tentative assignment of this enzyme to GH115 [1], which was later confirmed by the full protein sequence [4].

A GH115 member from Streptomyces pristinaespiralis produces both 4-O-methyl-D-glucuronic acid and non-methylated D-glucuronic acid from xylan and xylo-oligosaccharides [5].

References

1. Ryabova O, Vrsanská M, Kaneko S, van Zyl WH, and Biely P. (2009). A novel family of hemicellulolytic alpha-glucuronidase. FEBS Lett. 2009;583(9):1457-62. DOI:10.1016/j.febslet.2009.03.057 |
2. Khandke KM, Vithayathil PJ, and Murthy SK. (1989). Purification and characterization of an alpha-D-glucuronidase from a thermophilic fungus, Thermoascus aurantiacus. Arch Biochem Biophys. 1989;274(2):511-7. DOI:10.1016/0003-9861(89)90464-5 |
3. Tenkanen M and Siika-aho M. (2000). An alpha-glucuronidase of Schizophyllum commune acting on polymeric xylan. J Biotechnol. 2000;78(2):149-61. DOI:10.1016/s0168-1656(99)00240-0 |
4. Chong SL, Battaglia E, Coutinho PM, Henrissat B, Tenkanen M, and de Vries RP. (2011). The α-glucuronidase Agu1 from Schizophyllum commune is a member of a novel glycoside hydrolase family (GH115). Appl Microbiol Biotechnol. 2011;90(4):1323-32. DOI:10.1007/s00253-011-3157-y |

   Note: Due to a problem with PubMed data, this reference is not automatically formatted. Please see these links out: DOI:10.1007/s00253-011-3157-y PMID: 21442271

5. Fujimoto Z, Ichinose H, Biely P, and Kaneko S. (2011). Crystallization and preliminary crystallographic analysis of the glycoside hydrolase family 115 α-glucuronidase from Streptomyces pristinaespiralis. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011;67(Pt 1):68-71. DOI:10.1107/S1744309110043721 |

   Note: Due to a problem with PubMed data, this reference is not automatically formatted. Please see these links out: DOI:10.1107/S1744309110043721 PMID: 21206027

6. Kolenová K, Ryabova O, Vrsanská M, and Biely P. (2010). Inverting character of family GH115 α-glucuronidases. FEBS Lett. 2010;584(18):4063-8. DOI:10.1016/j.febslet.2010.08.031 |

   Note: Due to a problem with PubMed data, this reference is not automatically formatted. Please see these links out: DOI:10.1016/j.febslet.2010.08.031 PMID: 20804758