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Difference between revisions of "Glycoside Hydrolase Family 80"
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|- | |- | ||
|'''Mechanism''' | |'''Mechanism''' | ||
| − | | | + | |not determined |
|- | |- | ||
|'''Active site residues''' | |'''Active site residues''' | ||
| − | | | + | |inferred |
|- | |- | ||
|{{Hl2}} colspan="2" align="center" |'''CAZy DB link''' | |{{Hl2}} colspan="2" align="center" |'''CAZy DB link''' | ||
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== Substrate specificities == | == Substrate specificities == | ||
| − | + | Glycoside hydrolases of family 80 include bacterial proteins. The were characterized from proteobacteria <cite>Park1999</cite> of from species belonging to the Bacteroidetes/Chlorobi group <cite>Matsuda 2001 Yi2004</cite>. | |
| − | |||
| Line 54: | Line 53: | ||
== References == | == References == | ||
<biblio> | <biblio> | ||
| − | # | + | #Park1999 pmid=10542164 |
| − | # | + | #Matsuda2001 Matsuda, Y., Iida, I., Shinogi, T., Kakutani, K., Nonomura, T., Toyoda, H. (2001) ''In vitro'' suppression of mycelial growth of ''Fusarium oxysporum'' by extracellular chitosanase of ''Sphingobacterium multivorum'' and cloning of the chitosanase gene ''csn''SM1. J. Gen. Plant Pathol. 67, 318-324. |
| + | #Yi2004 Yi, J.-H., Jang, H.-K., Lee, S.-J., Lee, K.-E., Choi, S.-G. (2004) Purification and properties of chitosanase from chitinolytic beta-Proteobacterium KNU3. J. Microbiol. Biotechnol. 14, 337-343. | ||
| + | |||
#StickWilliams isbn=978-0-240-52118-3 | #StickWilliams isbn=978-0-240-52118-3 | ||
#Sinnott1990 Sinnott, M.L. (1990) Catalytic mechanisms of enzymic glycosyl transfer. Chem. Rev. 90, 1171-1202. [http://dx.doi.org/10.1021/cr00105a006 DOI: 10.1021/cr00105a006] | #Sinnott1990 Sinnott, M.L. (1990) Catalytic mechanisms of enzymic glycosyl transfer. Chem. Rev. 90, 1171-1202. [http://dx.doi.org/10.1021/cr00105a006 DOI: 10.1021/cr00105a006] | ||
Revision as of 13:26, 12 July 2011
This page is currently under construction. This means that the Responsible Curator has deemed that the page's content is not quite up to CAZypedia's standards for full public consumption. All information should be considered to be under revision and may be subject to major changes.
- Author:
- Responsible Curator: ^^^Ryszard Brzezinski^^^
| Glycoside Hydrolase Family GH80 | |
| Clan | GH-I |
| Mechanism | not determined |
| Active site residues | inferred |
| CAZy DB link | |
| http://www.cazy.org/GH80.html | |
Substrate specificities
Glycoside hydrolases of family 80 include bacterial proteins. The were characterized from proteobacteria [1] of from species belonging to the Bacteroidetes/Chlorobi group [2, 3, 4].
Kinetics and Mechanism
Content is to be added here.
Catalytic Residues
Content is to be added here.
Three-dimensional structures
Content is to be added here.
Family Firsts
- First stereochemistry determination
- Cite some reference here, with a short (1-2 sentence) explanation [5].
- First catalytic nucleophile identification
- Cite some reference here, with a short (1-2 sentence) explanation [6].
- First general acid/base residue identification
- Cite some reference here, with a short (1-2 sentence) explanation [7].
- First 3-D structure
- Cite some reference here, with a short (1-2 sentence) explanation [8].
References
- Park JK, Shimono K, Ochiai N, Shigeru K, Kurita M, Ohta Y, Tanaka K, Matsuda H, and Kawamukai M. (1999). Purification, characterization, and gene analysis of a chitosanase (ChoA) from Matsuebacter chitosanotabidus 3001. J Bacteriol. 1999;181(21):6642-9. DOI:10.1128/JB.181.21.6642-6649.1999 |
-
Yi, J.-H., Jang, H.-K., Lee, S.-J., Lee, K.-E., Choi, S.-G. (2004) Purification and properties of chitosanase from chitinolytic beta-Proteobacterium KNU3. J. Microbiol. Biotechnol. 14, 337-343.
-
Sinnott, M.L. (1990) Catalytic mechanisms of enzymic glycosyl transfer. Chem. Rev. 90, 1171-1202. DOI: 10.1021/cr00105a006
- Robert V. Stick and Spencer J. Williams. (2009) Carbohydrates. Elsevier Science.
-
Matsuda, Y., Iida, I., Shinogi, T., Kakutani, K., Nonomura, T., Toyoda, H. (2001) In vitro suppression of mycelial growth of Fusarium oxysporum by extracellular chitosanase of Sphingobacterium multivorum and cloning of the chitosanase gene csnSM1. J. Gen. Plant Pathol. 67, 318-324.