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  • Glycoside Hydrolase Family 107
    ...right|350px|Figure 2: ''Psychromonas sp.'' GH107 global structure (PDB: [{{PDBlink}}6m8n 6m8n]).]] ...ght|350px|Figure 3: ''Psychromonas sp.'' GH107 catalytic residues (PDB: [{{PDBlink}}6m8n 6m8n]).]]
    4 KB (597 words) - 14:19, 18 December 2021
  • Glycoside Hydrolase Family 125
    ...Blink}}3p2c 3p2c]) and one GH125 from ''Bacteroides thetaiotaomicron'' ([{{PDBlink}}2p0v 2p0v]) are notable as they were the first deposited structures for me ...es'' sp. proteins ([{{PDBlink}}3on6 3on6], [{{PDBlink}}3p2c 3p2c], and [{{PDBlink}}2p0v 2p0v]). These structures were determined by the Structural Genomics C
    5 KB (663 words) - 14:38, 18 December 2021
  • Carbohydrate Esterase Family 15
    ...s0 6GS0]), and (C) ''Tt''CE15A from ''Teredinibacter turnerae'' (PDB ID [{{PDBlink}}6hsw 6HSW]) are shown in cartoon representation. The catalytic triad in ea ...similar structure of the fungal ''Cu''GE from ''Cerrena unicolor'' (PDB [{{PDBlink}}6rv9 6rv9]).
    6 KB (809 words) - 08:42, 16 August 2023
  • Glycoside Hydrolase Family 144
    ...[{{PDBlink}}5gzh 5GZH] and [{{PDBlink}}5gzk 5GZK]) and BDI_3064 (PDB ID [{{PDBlink}}5z06 5Z06]) were determined by X-ray crystallography and revealed the (α/ ...'' species (PDB IDs [{{PDBlink}}3eu8 3EU8], [{{PDBlink}}4gl3 4GL3], and [{{PDBlink}}4qt9 4QT9]) were deposited in the PDB database before the deposition of th
    6 KB (775 words) - 22:06, 1 February 2024
  • Glycoside Hydrolase Family 79
    ...enzyme of GH79 (PDB IDs [{{PDBlink}}3vny 3vny], [{{PDBlink}}3vnz 3vnz], [{{PDBlink}}3vo0 3vo0]) <cite> Michikawa2012 </cite>. The catalytic domain of the enzy ...-glucuronidase (PDB IDs [{{PDBlink}}3vny 3vny], [{{PDBlink}}3vnz 3vnz], [{{PDBlink}}3vo0 3vo0]) <cite> Michikawa2012 </cite>.
    4 KB (515 words) - 14:17, 18 December 2021
  • Polysaccharide Lyase Family 2
    ...acturonate ([{{PDBlink}}2v8k PDB 2v8k], 2.1 Å) and a transition metal ([{{PDBlink}}2v8j PDB 2v8j], 2.01 Å). Family 2 PLs adopt a rare &alpha;/&alpha;<sub>7< ...ott2007</cite> ([{{PDBlink}}2v8i PDB 2v8i], [{{PDBlink}}2v8j PDB 2v8j], [{{PDBlink}}2v8k PDB 2v8k]).
    5 KB (674 words) - 14:17, 18 December 2021
  • Carbohydrate Binding Module Family 42
    ...515 ''Clostridium thermocellum''] (&beta;-subdomain is non-functional) ([{{PDBlink}}3kmv 3kmv]) <cite>Ribeiro2010</cite>. ...h arabinose as a full-length structure with a catalytic [[GH54]] domain [{{PDBlink}}1wd4 1wd4] <cite>Miyanaga2004</cite>.
    6 KB (815 words) - 14:14, 18 December 2021
  • Glycoside Hydrolase Family 164
    ...DBlink}}6T5O 6T5O], [{{PDBlink}}6T75 6T75], [{{PDBlink}}6T7G 6T7G], and [{{PDBlink}}6T6G 6T6G].'']] ...6T6G]), and as a covalent 2-deoxy-2-fluoromannosyl-enzyme intermediate ([{{PDBlink}}6T75 PDB ID 6T75]). Bs164 exists as a donut shaped trimer (Figure 1A). Eac
    5 KB (663 words) - 14:19, 18 December 2021
  • User:Mario Murakami
    [{{PDBlink}}6UAQ PDB ID 6UAQ] - Subgroup I endo-beta-1,3-glucanase from ''Amycolatopsi [{{PDBlink}}6UAR PDB ID 6UAR] - AmGH128_I in complex with laminaritriose
    12 KB (1,725 words) - 06:10, 22 June 2020
  • Surface Binding Site
    ...''Figure 1. The barley α-amylase 1 in complex with maltoheptaose PDB ID [{{PDBlink}}1rp8 1rp8]''' <cite>Robert2005</cite>. Several of the key SBS residues are |[[GH1]]||2||[{{PDBlink}}1uyq 1uyq]||Unpublished
    7 KB (1,028 words) - 14:17, 18 December 2021
  • Carbohydrate Binding Module Family 9
    ...rom ''Caldicellulosiruptor kristjanssonii'' with cellotriose as ligand ([{{PDBlink}}7nwq PDB 7nwq]) <cite>Krska2021</cite>.]] ...o PDB 7nwo]), cellobiose ([{{PDBlink}}7nwp PDB 7nwp]), and cellotriose ([{{PDBlink}}7nwq PDB 7nwq]) <cite>Krska2021</cite>) the binding pose was however not a
    6 KB (873 words) - 04:37, 31 August 2023
  • Carbohydrate Binding Module Family 71
    [[File:CBM71-1.png|thumb|300px|right|'''Figure 1.''' Structure of CBM71-1 ([{{PDBlink}}4CUB 4CUB]). Cartoon representation of CBM71-1 in complex with LacNAc (gre ...71-1CatSite.png|thumb|300px|right|'''Figure 2.''' CBM71-1 binding site ([{{PDBlink}}4CUB 4CUB]). Residues involved in binding LacNAc (green) are shown as cyan
    4 KB (576 words) - 14:14, 18 December 2021
  • Carbohydrate Binding Module Family 28
    ...ith CBM17 ([{{PDBlink}}1j84 1j84]) <cite>Notenboom2011</cite> and CBM4 ([{{PDBlink}}1gu3 1gu3]) <cite>Boraston2002-2</cite>. Sugars of cellooligosaccharides ( ...n open cleft. '''Figure 1''' shows the cellopentaose complex structure ([{{PDBlink}}3aci 3aci]) of CBM28 in [[GH5]] Cel5A from [http://www.ncbi.nlm.nih.gov/Ta
    6 KB (846 words) - 14:15, 18 December 2021
  • Carbohydrate Binding Module Family 94
    ...olution structure of ''B. mori'' CBM94 in complex with β-GlcNAc (PDB ID [{{PDBlink}}7XTN 7XTN]) indicates that Tyr429, Trp445, Asp480, and Trp535 contribute t ...mori'' GnT-IV ortholog CBM94 in complex with GlcNAc (''magenta'' stick) [{{PDBlink}}7XTN 7XTN]. ]]
    6 KB (861 words) - 01:53, 13 April 2023
  • Glycoside Hydrolase Family 89
    ...structure and surface representation of the ''C. perfringens'' CpGH89 [{{PDBlink}}4a4a 4a4a] double catalytic mutant Michaelis complex <cite>Ficko-Blean-Mic ...ichaelis-complex2012</cite>. The structure of the human enzyme NAGLU, [{{PDBlink}}4xwh 4xwh], was released in 2019 <cite>Birrane2019</cite>.
    7 KB (872 words) - 14:38, 18 December 2021
  • Carbohydrate Esterase Family 2
    ...rtate from completing the triad <cite>Montanier2009</cite>. ''Cj''CE2A ([{{PDBlink}}2WAA PDB ID 2WAA]) is an exception, as it has a functioning catalytic tria ...ng||thumb|300px|right|'''Figure 1.''' ''Cj''CE2B from ''C. japonicus'' ([{{PDBlink}}2W9X PDB ID 2W9X]) ]]
    10 KB (1,440 words) - 14:18, 18 December 2021
  • Carbohydrate Binding Module Family 6
    ...the CBM6 from ''Cellvibrio mixtus'' <cite>Henshaw2004;Pires2004</cite> ([{{PDBlink}}1uxz PDB 1uxz]). An updated list of all available three-dimensional struct ...gand was determined for the CsCBM6-3 from ''Clostridium stercorarium'' ([{{PDBlink}}1o8p PDB 1o8p])<cite>Boraston2003</cite>.
    7 KB (1,039 words) - 14:15, 18 December 2021
  • Glycoside Hydrolase Family 188
    ...p. strain U41 SqgA (PDB [{{PDBlink}}8QC3 8QC3], [{{PDBlink}}8QC6 8QC6], [{{PDBlink}}8QC5 8QC5]) <cite>#Kaur2024</cite>. Each enzyme possesses an N-terminal d
    5 KB (629 words) - 10:33, 19 December 2023
  • Glycoside Hydrolase Family 48
    File:1FAE.jpg|PDB ID [{{PDBlink}}1fae 1fae] from "Crystal structure of the cellulase CEL48F from ''C. cellu File:1L1Y.jpg|PDB ID [{{PDBlink}}1l1y 1l1y] and [{{PDBlink}}1l2a 1l2a] from "The Crystal Structure and Catalytic Mechanism of Cellobio
    8 KB (1,081 words) - 14:20, 18 December 2021
  • Glycoside Hydrolase Family 136
    ...82 Å (PDB ID [{{PDBlink}}5GQF 5GQF]), and GNB complex at 2.70 Å (PDB ID [{{PDBlink}}5GQG 5GQG]) were determined <cite>chihaya2017</cite>. The X-ray crystal structure of '' Er''GH136 in complex with LNB (PDB ID [{{PDBlink}}6KQT 6KQT]) revealed the N-terminal domain (''Er''Lnb136I, from AA 7-224)
    4 KB (566 words) - 12:57, 25 June 2023

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