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• Glycoside Hydrolase Family 93
  ...1. Cartoon representation of the overall structure of Arb93A''' (PDB ID [{{PDBlink}}2w5o 2W5O] <cite>Carapito2009</cite>.The propeller is colored blue to red ...y for deoxyiminoarabinobiose bound to the active site of Arb93A (PDB ID [{{PDBlink}}2ydt 2YDT] <cite>GoddardBorger2011</cite>.''' Hydrogens bond are represent
  5 KB (676 words) - 09:17, 5 March 2019
• Carbohydrate Binding Module Family 89
  ...ture, connecting the 11^th and 12^th helical turns ([{{PDBlink}}7jvi PDB 7JVI]). The role of the ion seems to be only related to the domai ;First Structural Characterization: The first CBM89 structure is [{{PDBlink}}7jvi PDB 7JVI], retrieved from the capybara gut microbiome <cite>Cabral202
  4 KB (538 words) - 03:21, 6 July 2023
• Glycoside Hydrolase Family 8
  ...&Aring;) resolution structure of CelA in complex with substrate (PDB ID [{{PDBlink}}1kwf 1kwf]) has been determined <cite>Guerin2002</cite>. ...elA from ''Clostridium thermocellum'' by X-ray crystallography (PDB ID [{{PDBlink}}1cem 1cem]) <cite>Alzari1996</cite>.
  5 KB (653 words) - 14:15, 18 December 2021
• Glycoside Hydrolase Family 162
  ...ucture.jpg|thumb|350px|'''Figure 3. Overall structure of ''Tf''SGL (PDB [{{PDBlink}}6IMU 6IMU]).''' ]]
  7 KB (996 words) - 20:03, 1 February 2024
• Glycoside Hydrolase Family 82
  ...ucture belongs to the &beta;-helix fold ([{{PDBlink}}1h80 PDB 1h80] and [{{PDBlink}}1ktw PDB 1ktw]).
  4 KB (537 words) - 14:18, 18 December 2021
• Glycoside Hydrolase Family 95
  ...[{{PDBlink}}2ead 2ead] E566A in complex with 2'-fucosyllactose, PDB ID [{{PDBlink}}2eae 2eae] D766A in complex with fucose and lactose) <cite>Nagae2007</cite
  6 KB (915 words) - 14:16, 18 December 2021
• Glycoside Hydrolase Family 7
  ...the first endoglucanase, ''Fusarium oxysporum'' EG I (Cel7B), in 1996 ([{{PDBlink}}1ovw PDB 1ovw]) <cite>Sulzenbacher1996</cite>. The proteins are built up a ...up>1,4</sup><i>B</i> boat conformation is reqiured prior to hydrolysis ([{{PDBlink}}1ovw PDB 1ovw]) <cite>Sulzenbacher1996</cite>.
  8 KB (1,054 words) - 14:15, 18 December 2021
• Carbohydrate Binding Module Family 81
  ...structure representation of CBM_E1 complexed with cellopentaose (PDB ID [{{PDBlink}}5kle 5KLE]), the first member of family CBM81.''' CBM_E1 presents a beta s ...e (PDB ID [{{PDBlink}}5klc 5KLC]) and presence of cellopentaose (PDB ID [{{PDBlink}}5kle 5KLE]), were obtained independent of the catalytic module <cite>Campo
  6 KB (812 words) - 14:17, 18 December 2021
• Carbohydrate Binding Module Family 32
  ...ondary structure representation of the ''C. perfringens'' NagJ CpCBM32C [{{PDBlink}}2j1e 2J1e] showing the tryptophan platform, found in the terminal loop reg ...an2012</cite>, [{{PDBlink}}4a6o 4A6O] <cite>Ficko-Blean2012</cite>, and [{{PDBlink}}2w1u 2W1U] <cite>Ficko-Blean2009</cite>, to name just a few. An updated l
  10 KB (1,343 words) - 05:38, 25 August 2022
• Carbohydrate Esterase Family 7
  ...Image:CAH Bsubtilis CE7.jpg|thumb|300px|Figure 1: CAH from B. subtilis ([{{PDBlink}}1ODS PDB ID 1ODS]). A) An individual monomer from the overall CAH struct ...-crystallized with PMSF and paraoxan ([{{PDBlink}}3M82 PDB ID 3M82] and [{{PDBlink}}3M83 PDB ID 3M83], respectively), two known serine protease inhibitors, th
  12 KB (1,657 words) - 14:18, 18 December 2021
• Carbohydrate Binding Module Family 66
  ...e 1.''' The crystal structure of BsCBM60 in complex with levanotriose ([{{PDBlink}}4B1M PDB ID 4B1M]), highlighting the location of the ligand binding site o ...n complex with fructose ([{{PDBlink}}4B1L PDB ID 4B1L]) or levantriose ([{{PDBlink}}4B1M PDB ID 4B1M]) the sugars were located in the broad pocket demonstrati
  7 KB (1,036 words) - 14:16, 18 December 2021
• Auxiliary Activity Family 11
  ...Quinlan2011</cite>) and ''Bacillus amyloliquefaciens'' [[AA10]] (PDB ID [{{PDBlink}}2yoy 2YOY] <cite>Hemsworth2013b</cite>) in the same orientation showing ho ...ture: AA11 from ''A. oryzae'' with Zn2+ [{{PDBlink}}4mah 4MAH] & Cu(I) [{{PDBlink}}4mai 4MAI] <cite>Hemsworth2013</cite>
  8 KB (1,155 words) - 14:14, 18 December 2021
• Glycoside Hydrolase Family 141
  ...e:BT1002.png|thumb|300px|right|'''Figure 1.''' '''BT1002 strucutre'''. ([{{PDBlink}}5MQP PDB ID 5PDB]) The figure shows the β-parallel catalytic domain (pur ...tructure has been determined for ''B. thetaiotaomicron'' BT1002 at 2 Å ([{{PDBlink}}5MQP PDB ID 5PDB]). The protein has two domains: a N-terminal β-sandwich
  4 KB (527 words) - 14:18, 18 December 2021
• Polysaccharide Lyase Family 22
  ...by YePL2A from ''Yersinia enterocolitica'' subsp. enterocolitica 8081 ([{{PDBlink}}3pe7 PDB 3PE7]), which was solved in complex with Mn²⁺ and acet ...VPA0088 from ''Vibrio parahaemolyticus'' RIMD 2210633 (''Unpublished:'' [{{PDBlink}}3c5m PDB 3C5M]).
  6 KB (743 words) - 14:20, 18 December 2021
• Glycoside Hydrolase Family 64
  ...4A in complex with two laminarihexaose chains (forest, pale green).''' ([{{PDBlink}}5H9Y PDB ID 5H9Y]) The barrel domain is shown in light pink, the &alpha;/& ...inaritetraose-bound structure of LPHase from ''Streptoymces matensis'' ([{{PDBlink}}3GD9 PDB ID 3GD9]) reveals that the barrel domain mediates most of the int
  6 KB (816 words) - 14:19, 18 December 2021
• Polysaccharide Lyase Family 4
  ...alytically impaired variant with substrate bound from -3 to +3 subsites[[{{PDBlink}}3njv 3NJV]]have been also determined <cite>Jensen2010</cite>.
  7 KB (979 words) - 14:15, 18 December 2021
• Carbohydrate Binding Module Family 2
  ...the ''Cellulomonas fimi'' GH10 xylanase Xyn10A (also known as Cex)(see [{{PDBlink}}1exg PDB ID 1exg]) highlighting the three planar tryptophans that are opti ...The fold of the CBM2 in the ''Cellulomonas fimi'' GH11 xylanase Xyn11D ([{{PDBlink}}2xbd PDB ID 2xbd]) highlighting the two perpendicular tryptophans that are
  10 KB (1,463 words) - 14:14, 18 December 2021
• Carbohydrate Binding Module Family 60
  ...t|'''Figure 1.''' The fold of ''v''CBM60 in complex with galactobiose ([{{PDBlink}}2XFE PDB ID 2XFE]), highlighting the location of the ligand binding site f ...galactobiose (Figure 2; [{{PDBlink}}2XFE PDB ID 2XFE]) and cellotriose ([{{PDBlink}}2XFD PDB ID 2XFD]) are located in the cleft, which thus comprises the liga
  7 KB (1,077 words) - 14:18, 18 December 2021
• Carbohydrate Binding Module Family 5
  ...|'''Figure 1.''' CBM5 of an endoglucanase from ''Erwinia chrysanthemi'' [{{PDBlink}}1AIW PDB ID 1AIW] showing surface exposed aromatic residues (Trp18, Trp43 ...modules#Types|type A]] CBMs <cite>Gilbert2013</cite>. The ''Ec''EGZCBM5 [{{PDBlink}}1AIW PDB ID 1AIW] possesses three exposed aromatic residues: Trp18, Trp43
  8 KB (1,113 words) - 06:55, 2 May 2024
• Glycoside Hydrolase Family 36
  ...ogous domain in [[GH27]] (e.g., ''Oryza sativa'' &alpha;-galactosidase, [{{PDBlink}}1uas PDB 1uas]). Notably, an extra N-terminal, primarily &beta;-sheet dom ...aritima'' &alpha;-galactosidase by X-ray crystallography. Coordinates ([{{PDBlink}}1zy9 PDB 1zy9]) deposited in 2005 as part of a high-throughput functional
  7 KB (891 words) - 14:20, 18 December 2021

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